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Israel |
Hebrew University - CASIM
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Offer Profile
Our main focus is on computer-aided orthopaedic
surgery and related applications. Specifically, we are developing techniques for
model construction and visualization of volumetric medical data, preoperative
planning and visualization, fluoroscopic X-ray and ultrasound image processing,
anatomy-based registration, and image-guided and robot-based navigation.
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Product Line Up
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New Projects: Interventional endovascular procedures
simulation with patient-specific carotid arteries models generated from CTA
scans
1. School of Eng. and Computer Science, The Hebrew
Univ. of Jerusalem, Israel.
2. Simbionix LTD, Israel.
3. Dept of Radiology, School of Medicine, Hadassah Hebrew U, Medical Center,
Israel.
Purpose
Minimally invasive endovascular surgeries such as carotid, coronary, and
cardiac angiographic procedures are frequent in interventional radiology.
They require experienced physicians and involve time-consuming trial and
error with repeated contrast agent injection and X-ray imaging. This leads
to outcome variability and non-negligible complication rates. Training
simulators such the ANGIO MentorTM (Simbionix LTD. Israel, 2008) have the
potential to significantly reduce the physicians’ learning curve, improve
their performance, and reduce the outcome variability. A key limitation is
the simulators’ reliance on hand-tailored anatomical models generated by a
technician from CTA scans, which are impractical to produce for each patient
in a clinical environment.
Patient specific simulation requires the segmentation of the entire
vascular anatomy including the Common Carotid Artery (CCA), the
extracranial Internal Carotid Artery (ICA) and External Carotid Artery (ECA),
the ECA branches, the Carotid Bifurcation (CB), the Subclavian Arteries
(SA), and the Aortic Arch (AA). The vertebral arteries are desired but not
required for the simulation. These vessel structures usually have a very
large intra and inter-patient intensity and geometrical shape variability,
are near bone structures with similar intensity values, and suffer from
imaging artifacts caused by metallic objects such as dental implants. In
addition, in many pathological cases, severe stenosis around the carotid
bifurcation frequently causes segmentation failure. Therefore the generation
of patient specific models for simulation is a challenging task.
Materials and Method
In this study, we conducted a preliminary evaluation of the resulting
segmentation models using our new method for patient-specific carotid
interventional radiology simulations. The method starts with the
morphological-based segmentation of the aorta and the construction of a
prior intensity probability distribution function for arteries. The carotid
arteries are then segmented with a graph min-cut method based on a new edge
weights function that adaptively couples voxel intensity, intensity prior,
and geometric vesselness shape prior. Finally, the same graph-cut
optimization framework is used to interactively remove a few vessel segments
and to fill minor vessel discontinuities caused by intensity variations.
In the study, we used a Simbionix ANGIO MentorTM (Simbionix LTD. Israel,
2008) station. The ANGIO MentorTM is an integrated software and hardware
endovascular simulation platform (Fig. 1a). It simulates interventional
vascular procedures based on a diagnostic CTA and a vasculature simulation
model. It supports realistic haptic catheter insertion and manipulation
feedback (Fig. 1b) and creates continuous fluoroscopic X-ray imaging,
fluoroscopic C-arm positioning, and simulated contrast agent injection (Fig.
2a-c). For more details, see http://www.simbionix.com
Four CTA datasets acquired with administrated 100cc of non-iodinated of
contrast agent with a rapid injection aid at 3-4cc per sec. The CTA scans,
acquired on a Sensation 16 Siemens Medical Solutions scanner (Forchheim,
Germany) have in-plane pixel size 0.5x0.5mm2, matrix size 512x512, 0.55mm
slice spacing, and 750 slices. The patient specific models were generated
from the CTA images as follows. First, the carotid arteries systems were
segmented using a nearly-automatic method, 3D mesh with centerlines,
bifurcation points, and vascular radiuses were computed with the VMTK
software library automatic meshing and centerline generation modules. The
entire simulation model generation required less than 10 minutes for each on
a standard PC, most of it computation time without interaction.
Results
The simulation models were then directly transferred to the Simbionix ANGIO
MentorTM simulator platform. We then performed common interventional
radiology procedures, such as catheter insertion and manipulation, balloon
positioning and dilation, and stent placement on the patient-specific
models. Fig. 2a-c shows sample snapshots of the simulation with the
patient-specific models.
A movie showing the simulation with our 3D models is available in
http://www.cs.huji.ac.il/~freiman/vessels-cut
The simulations ran flawlessly and successfully in real time for over an
hour. The users reported great realism and an excellent overall experience,
which was significantly better than similar experiences with the previous
manually generated models. While this simulation experiment is qualitative
and preliminary, it constitutes a proof-of-concept of practical patient
specific carotid interventional radiology simulations from clinical CTA
scans.
Conclusion
We have presented a proof-of-concept of practical patient specific carotid
interventional radiology simulations from clinical CTA scans. Patient
specific models were generated using previously presented techniques, and
used for clinical simulation successfully. Our results indicate that the
generated models are accurate, robust, and provide useful information for
patient specific simulation.
We are currently expanding the using of patient specific models for
intra-operative mode guided interventional radiology procedures.
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Fig. 1a: Simbionix ANGIO MentorTM
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Fig. 1b: Haptic catheter manipulation.
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Fig. 2: Patient-specific simulation experiment
(a) Lateral simulated angiogram
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Fig. 2: Patient-specific simulation experiment
(b) AP simulated angiogram
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Fig. 2: Patient-specific simulation experiment
(c) bifurcation with stent – detail
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Research Projects
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Orthopaedics
1.Navigated metal detector probe for shrapnel removal
2.Patient-specific fracture CAD/CAM
3.Pelvic fracture reduction and fixation with EM tracking
4.Model-based reconstruction from a few X-rays
5.Evidence-based Computer-Aided Orthopaedic Surgery
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Radiology
1.Liver tumor and vessels visualization
2.Early cancer detection in MRI images
3.Registration of multiple sclerosis MRIs
4.Patient-specific preoperative simulation of endovascular surgical
procedures
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Neurosurgery
1.Miniature robot system for keyhole neurosurgery
2.Surface and landmark-based registration for IGS
3.Augmented reality probe for intraoperative navigation
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Generic technologies
1.Quantification of geometric uncertainty
2.Nearly-automatic segmentation of vascular anatomical structures
3.Virtual and augmented reality applications in surgery
4.Multimodal rigid and non-rigid registration algorithms
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Active grants
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- ROBOCAST: Robot and sensor integration as guidance for enhanced
computer-assisted surgery and therapy. 7th European Union Program,
Consortium of 8 univesities and 2 companies in Italy, Germany, UK, and
Israel, 2007-10.
- Patient-specific preoperative simulation of endovascular surgical
procedures, with Simbionix Ltd. and Dr. Sosna, Dept of Radiology,
Hadassah. Ministry of Trade and Industry, MAGNETON Grant 38652, 2007-09.
- Computer-aided intraoperative fracture reduction and fixation based
on electromagnetic tracking, with M. Liebergall, Dept of Orthopaedic
Surgery, Hadassah, Innovation Grant, the Hebrew University, 2006-07.
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Collaboration
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Current academic and clinical Israeli collaborations:
 Hadassah Ein Karem:
Departments of Radiology, Neurosurgery, Orthopaedics, and Institute for Gene
Therapy
Multiple Sclerosis Center, Sheba Medical Center
Laboratory for Robotics, Faculty of Mechanical Engineering, Technion
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Current collaborations with Israeli industry
- Simbionix
- Mazor Surgical Technologies
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Recent awards
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Title
 Kaye Innovation Award, The
Hebrew University of Jerusalem, June 2007.
Best Clinical Paper presentation, 6th Annual Meeting, Int. Society for
Computer-Aided Orthopaedic Surg ery, June 21-24, 2006, Montreal, Canada.
Outstanding Israeli Project, European Union 7th Framework Programme for
Research and Technological Development. Awarded by the European Commission
to the State of Israel, October 2007
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